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BIOL 3011: Genetics (Gotesman): Unit 9: Analysis of Genomes

Genetics: BIOL 3011

Topics for Unit 9: Analysis of Genomes

Lecture 18: Sequencing DNA and Genomes

Lecture 19: Analyzing DNA sequences

Readings: Analysis of Genomes (Unit 9)

External Links - read chapters online (internet connection required)

PDFs: for viewing content offline and printing.

FYI - No pdf for chapter 17.1 Biotechnology

Attribution:

OpenStax, Introduction. OpenStax CNX. Jan 29, 2013 http://cnx.org/contents/644feff4-c255-4063-811a-5104a2b430de@2.
 
OpenStax, Biotechnology. OpenStax CNX. Dec 19, 2016 http://cnx.org/contents/7b18387b-8014-4514-b0fe-2dbef5e9d532@8.
 
OpenStax, Mapping Genomes. OpenStax CNX. Apr 11, 2013 http://cnx.org/contents/42ae98d4-0d7a-4b6b-ba20-881b5e3be123@5.
 
OpenStax, Whole-Genome Sequencing. OpenStax CNX. Jun 26, 2013 http://cnx.org/contents/e65f38e1-9dfc-4da9-995c-f51db70d5abc@7.
 
OpenStax, Applying Genomics. OpenStax CNX. Apr 11, 2013 http://cnx.org/contents/29cd41e7-21fb-499e-9929-353ee596dbbe@5.
 
OpenStax, Genomics and Proteomics. OpenStax CNX. Apr 11, 2013 http://cnx.org/contents/74a63fe7-167c-4666-a28e-1f634d43c6c0@5.

Readings: Sanger Sequencing of DNA (Unit 9)

External Links - read chapters online (internet connection required)

PDFs: for viewing content offline and printing.

Attribution:

Seto, Jeremy. “Analyzing DNA -- Sanger Sequencing of DNA” Biology OER, OpenLab New York City College of Technology (NYCCT), https://openlab.citytech.cuny.edu/bio-oer/analyzing-dna/sanger-sequencing-of-dna/

Readings: Next Gen Sequencing (Unit 9)

External Links - read chapters online (internet connection required)

PDFs: for viewing content offline and printing.

Attribution:

Seto, Jeremy. “Analyzing DNA -- Next Gen Sequencing” Biology OER, OpenLab New York City College of Technology (NYCCT), https://openlab.citytech.cuny.edu/bio-oer/analyzing-dna/next-gen-sequencing/

Readings: RISC RNA interference (Unit 9)

Readings: CRE/LOX (Unit 9)

Readings: CRISPR (Unit 9)

External Links - read chapters online (internet connection required)

PDFs: for viewing content offline and printing.

Videos: CRISPR (Unit 9)


Important Message from Professor: There is an error at 5:55 in the video. The human genome project wasn’t sequenced from one person but many.
Attribution:
[wired] (2017, May 24) Biologist Explains One Concept in 5 Levels of Difficulty – CRISPR [Video File]. Retrieved from https://www.wired.com/video/2017/05/biologist-explains-one-concept-in-5-levels-of-difficulty-crispr/

Attribution:
[nature video] (2017, Oct. 31) CRISPR: Gene editing and beyond [Video File]. Retrieved from https://youtu.be/4YKFw2KZA5o

Videos: DNA Sequencing (Unit 9)


Attribution:
[Useful Genetics] (2015, Aug. 10) 1K - DNA sequencing [Video File]. Retrieved from https://youtu.be/diq-ggs-D1U

Videos: RISC (Unit 9)


Attribution:
[Saroj Sahu] (2010, Dec. 7) siRNA Pathway.flv [Video File]. Retrieved from https://youtu.be/FiGkE3RnjWY

Attribution:
[nature video] (2011, Dec. 16) RNA interference (RNAi) [Video File]. Retrieved from https://youtu.be/cK-OGB1_ELE

Videos: CRE/LOX (Unit 9)


Attribution:
[Mamunur Rashid] (2013, May 27) Cre-Lox Recombination Systems [Video File]. Retrieved from https://youtu.be/tLC3QzLYC6E